PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102760.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 340aa    MW: 37086.7 Da    PI: 7.873
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1123e-3572129359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                      v+YkeClkNhAaslGghavDGCgEfmps++++ +++++lkCaACgCHRnFHRr++ee
  XP_028102760.1  72 VVTYKECLKNHAASLGGHAVDGCGEFMPSPTSSpTDPTSLKCAACGCHRNFHRRDPEE 129
                     589****************************999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEEEEGRNKI EMEPPPPATA TATASVKTPE AETEAPTRIQ PSKPLSFTNG VLKRHHHRHH  60
RHHHHLSAPP VVVTYKECLK NHAASLGGHA VDGCGEFMPS PTSSPTDPTS LKCAACGCHR  120
NFHRRDPEEP LPAPTSTAAQ HVIEYQPHHR HHPLPPPPAP HPHGGHSSPN SASPPPISSS  180
YYPSAPHMLL ALSASLPGPP PENNPSMAPT AGTTAANSSG RKRFRTKFTQ DQKERMHELA  240
ERVGWKMQKR DEELINEFCS DVGVDRGVFK VWMHNNKNTF GKHNNGNGNG NGSGNSLDNH  300
ENNSNNNNHH HHHQNLSNQH QNNDSVSAHV VATNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39760.11e-38ZF-HD family protein