PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102942.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 199aa    MW: 23214.6 Da    PI: 10.0685
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.31.9e-1644125191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fYn Y+ +vGF++rk++ +k+k++++it+rtfvC+keg+   +k++    +++r+e r+gC+    ++     k+  ++++++HnH+l+p
  XP_028102942.1  44 DFYNIYGGKVGFNIRKAYANKNKHTKKITSRTFVCYKEGSWGIDKRD-PLVKNPRQEVRCGCT----IS----RKYIAYDFVKHHNHDLVP 125
                     6******************************************9999.778888888888885....44....45999**********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MAKEQHKRLR VIIMEENNIV DEYSNYGWKP KVGMPFDSEQ AAYDFYNIYG GKVGFNIRKA  60
YANKNKHTKK ITSRTFVCYK EGSWGIDKRD PLVKNPRQEV RCGCTISRKY IAYDFVKHHN  120
HDLVPQDCIH MLPSQRKIST TQAIEAELAS ESRIPLRSTC ELFGRESGGR ASLGFTKLDK  180
KNYLTSRREK IWNMEKRVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-24FAR1 family protein