PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102968.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 264aa    MW: 28911.9 Da    PI: 9.3841
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08172212954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR++i +++  L++l+P       +K++ a++L +A++Y+k L
  XP_028102968.1 172 ARHRREKISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 212
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDIDLLKSPS EDQIDMIMML QMDKLHVPDF CGGYSDVGDQ MSRTSLEFPT VLGSSSSSSN  60
VRTATQMIEN PHVSPSFMNP PSTTLSFGGG GGVQEPAELP FLSNSGRWRG GGGGEFPFPA  120
TTQSQKRNSM AAMREMIFRI AAMQPIHIDP ESVKPPKRRN VKISKDPQSV AARHRREKIS  180
ERIRILQRLV PGGTKMDTAS MLDEAIHYVK FLKTQVQSLE RAATNRPPPP TTGIGFPVSV  240
SNGIYLPGVK GYQTAQSLEQ YSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.18e-49bHLH family protein