PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103187.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 330aa MW: 38110 Da PI: 7.6554

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.5	1.6e-21	44	138	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + +gk++vt++ +HnHe+ XP_028103187.1 44 DFYNAYAKVNGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageEGKYVVTHFIADHNHEF 137 6***************9999.666699999*****99988877899999************987777799***********98 PP FAR1 90 a 90 a XP_028103187.1 138 A 138 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MNVEDGRADV KKEMVDDAHR NDMVGDVERA ILEQKFDSIE DREDFYNAYA KVNGFSIRKS 60 RFNTNKEGKV VSRLWLCSRE GQRLPKYLDR VAEKSRAPKA LTRVGCKAQF RIRYDADAGE 120 EGKYVVTHFI ADHNHEFAEQ HCVMYLRSHC NLNSADKAQA MAMRNVGVKT SQIMDYMVNQ 180 SGSYENVGFI RTDLHNHIQA ERRAEVEDDS KSRADYAKFG DVLIFDSTYR TNAYKKPFVM 240 LAANKTIETY TWVLETFMEA MGNKAPVSVL TDGDKAMREA IRRVFPDTRH RLCNWHLGKN 300 VVSNVYISGF AHAFKQYMDM EMDETKFEHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-43	FAR1 family protein