PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028103201.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 112aa    MW: 12970.2 Da    PI: 10.7399
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028103201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.32.6e-20953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr e++sn+qvt+ +RrngilKKA+EL +LCd+++ +++f +tgk
  XP_028103201.1  9 KRLESTSNQQVTYLRRRNGILKKAKELFILCDIDIVLLMFCPTGK 53
                    689*****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MGRVKLKIKR LESTSNQQVT YLRRRNGILK KAKELFILCD IDIVLLMFCP TGKATLFRRE  60
RSNIQEVITK FAQLTPQERT KSSLESLEAP KKTFKKLDHD VNIQDFLGSS TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.16e-59M-type_MADS family protein