PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028103221.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 169aa    MW: 19713.2 Da    PI: 4.585
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028103221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.62.1e-112361147
                     HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +l+d+++q  ++ W++Iar+m+ gRt++ +k++w+  
   XP_028103221.1  2 KLIDVHRQICNK-WAAIAREMP-GRTENTIKNHWNET 36
                     79**********.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MKLIDVHRQI CNKWAAIARE MPGRTENTIK NHWNETKRRR FSKRKGQYSS LLQDYIKSLL  60
SDSTVTDGQE SPSINSNLRI VDNTDLEEDN KDQKDPTSNS DKAVDYQIYE KMAVEKDDFG  120
SMLNESNKAE LEMEMEMEIM PAELMDKEMS FDINNKDMKL LEMLCQGIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13945RRFSKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.11e-21MYB family protein