PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028103481.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 164aa    MW: 17797.8 Da    PI: 6.5288
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028103481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.44.3e-5825122198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++yreleg
  XP_028103481.1  25 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLTRYRELEG 119
                     69********************************************************************************************* PP

           NF-YB  96 ekk 98 
                     ++k
  XP_028103481.1 120 DTK 122
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MADAPASPAG GSHESGGDQS PRSNVREQDR YLPIANISRI MKKALPANGK IAKDAKDTVQ  60
ECVSEFISFI TSEASDKCQK EKRKTINGDD LLWAMATLGF EDYIDPLKAY LTRYRELEGD  120
TKGSARSGDG SSKKDAVGAQ LGPNAQFAHQ GSFTQGMNYV NYQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.16e-85NF-YB family protein