PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028103524.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 168aa    MW: 18759.5 Da    PI: 8.2867
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028103524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-0743128888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkv.kkekdgkwevtkleleHnHe 88 
                     ++ GF v++++s +    +++ +  + C ++g+ + +kk      ++k  + + ++++gC  +l+  k+++d+ w+v+     HnH+
  XP_028103524.1  43 RKNGFVVVIKTSDYG-GGHRTPRIYLACERSGQYRAHKKLkgddsNKKIVKITGTKKCGCPFELRAcKLMDDDDWMVDVACGMHNHA 128
                     688*******99998.5555788899******999888876776666666778889999999998526677***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
NCASVECSNV GSGGLVDYTS QFITNEIFKS KEELLGWVRD VGRKNGFVVV IKTSDYGGGH  60
RTPRIYLACE RSGQYRAHKK LKGDDSNKKI VKITGTKKCG CPFELRACKL MDDDDWMVDV  120
ACGMHNHAPA KHFEEHSFAG RLSEEETSLL VDMSKSMVRP KEILVTLK