PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103734.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 648aa MW: 71322.9 Da PI: 5.1727

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39	1.5e-12	466	511	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_028103734.1 466 NHVEAERQRREKLNQRFYSLRAVVPNV-----SKMDKASLLGDAIAYINEL 511 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MTDYRLPAWT DDNASMMDAF GNSDLTSFWP APPLSSSAST TANHHLSPPL FNQETLQQRL 60 QALIEGARES WTYAIFWQSS SGDYSGGSLL GWGDGYYKGE EDKAKRKAVA PSSAEEQEHR 120 KKVLRELNSL ISGASPSSSD EIIDEEVTDT EWFFLVSMTQ SFVNGSGFPG QAFFNSSPIW 180 VAGADRLASS PCERARQGQV FGLQTMVCIP SVTGVVELGS TELIFQNSDL MTKVRVLFNF 240 NSIELGSWSM QINPDENDPS TLYITDPSSI EIRETVNTTT PVSIPPNNHQ SSKQIAFENP 300 NSISCQQTQQ QQTHSQSFLA RELNFTEFDR DGTSIRNGNS TSCKPESGEI LNFGESKRSS 360 CSPNENLFSG NSQFGSAEDN NSKKKTSPTS RGSNEEGMLS FTSGVILPSS GTVKSNGGGG 420 GGGDSDHSDL EASVVREVES SRVVEPEKKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ 480 RFYSLRAVVP NVSKMDKASL LGDAIAYINE LKSNLQAAES DKDEMRNQID CLKKELANKE 540 SRNSGPPQPP DQNLISNHHG NISNLIDVEI DVKIIGWDAM IRIQSNKKNH PAAKVMSALK 600 ELDLDVHHAS VSVVNDLMNQ QATVKMGSRY YTQEQLRMAL SAKIGDTR

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MTDYRLPAWT DDNASMMDAF GNSDLTSFWP APPLSSSAST TANHHLSPPL FNQETLQQRL  60
QALIEGARES WTYAIFWQSS SGDYSGGSLL GWGDGYYKGE EDKAKRKAVA PSSAEEQEHR  120
KKVLRELNSL ISGASPSSSD EIIDEEVTDT EWFFLVSMTQ SFVNGSGFPG QAFFNSSPIW  180
VAGADRLASS PCERARQGQV FGLQTMVCIP SVTGVVELGS TELIFQNSDL MTKVRVLFNF  240
NSIELGSWSM QINPDENDPS TLYITDPSSI EIRETVNTTT PVSIPPNNHQ SSKQIAFENP  300
NSISCQQTQQ QQTHSQSFLA RELNFTEFDR DGTSIRNGNS TSCKPESGEI LNFGESKRSS  360
CSPNENLFSG NSQFGSAEDN NSKKKTSPTS RGSNEEGMLS FTSGVILPSS GTVKSNGGGG  420
GGGDSDHSDL EASVVREVES SRVVEPEKKP RKRGRKPANG REEPLNHVEA ERQRREKLNQ  480
RFYSLRAVVP NVSKMDKASL LGDAIAYINE LKSNLQAAES DKDEMRNQID CLKKELANKE  540
SRNSGPPQPP DQNLISNHHG NISNLIDVEI DVKIIGWDAM IRIQSNKKNH PAAKVMSALK  600
ELDLDVHHAS VSVVNDLMNQ QATVKMGSRY YTQEQLRMAL SAKIGDTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	448	456	KKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-176	bHLH family protein