PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103867.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 364aa MW: 41983.6 Da PI: 6.7319

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.9	7.9e-24	28	118	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs+rk++++k+++++eit+r fvC+k g+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028103867.1 28 DFYNTYGGKVGFSIRKAYTNKNRQTKEITSRMFVCYKDGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 118 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MEENNIVDDC GWKPKVGMPF DSEQAAYDFY NTYGGKVGFS IRKAYTNKNR QTKEITSRMF 60 VCYKDGSRGI DKRDPLVKNP RQEVRCGCGA RFSIKLDRIS GKYIACDFVE HHNHDLVPQD 120 CIHMLPSQRK ISITQAIEVE LASQSGIPLR SAYELFGRES GRRASLGFTK LDQKNYLRSK 180 RQKDLEYGEV GNVLHYFRKK TVENPSFFYA VQLDCDEQIS NIFWADAQMI MDYAQFGDVV 240 TFDTTYKLNN EHRPFGSFVG FNYHRETVIF GAVLMYDETA ESFTWLFQIF LEAMSNKAPK 300 TVFTYQDAAM AKAIPIVMPD TNHRPCTWHL MQNAVKHVSS VFDDVGVKGM FAKFMHDIDD 360 EEEF

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MEENNIVDDC GWKPKVGMPF DSEQAAYDFY NTYGGKVGFS IRKAYTNKNR QTKEITSRMF  60
VCYKDGSRGI DKRDPLVKNP RQEVRCGCGA RFSIKLDRIS GKYIACDFVE HHNHDLVPQD  120
CIHMLPSQRK ISITQAIEVE LASQSGIPLR SAYELFGRES GRRASLGFTK LDQKNYLRSK  180
RQKDLEYGEV GNVLHYFRKK TVENPSFFYA VQLDCDEQIS NIFWADAQMI MDYAQFGDVV  240
TFDTTYKLNN EHRPFGSFVG FNYHRETVIF GAVLMYDETA ESFTWLFQIF LEAMSNKAPK  300
TVFTYQDAAM AKAIPIVMPD TNHRPCTWHL MQNAVKHVSS VFDDVGVKGM FAKFMHDIDD  360
EEEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-83	FAR1 family protein