PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103873.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 345aa MW: 38676.5 Da PI: 10.3249

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.4	1.2e-31	192	245	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_028103873.1 192 PRMRWTTTLHARFVYAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 245 9****************************************************7 PP
2	Myb_DNA-binding	48.3	2.3e-15	193	244	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_028103873.1 193 RMRWTTTLHARFVYAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 244 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MELFPAQPDL SLQISLPNPN PNPNPNPNTK TTSGWSWRRS DEEAMKASIN TAFKLSSFLA 60 NPDAMEPNSS SSSPFPPPPP PHLFYGRKNG SLLPPNQLYS QQQQLVHHHY HHQQQQGFHN 120 QREFDYLRPI RGIPVYHHHH HHQNPPSLLD SSPSTITTTP TTFLHSTTTN SNNIAKSQIL 180 SRFPAKRRVR APRMRWTTTL HARFVYAVEL LGGHERATPK SVLELMNVKD LTLAHVKSHL 240 QMYRTIKTTD RPATSSGQSD GLGSDLGGDQ NSENIFSPSK TGLSIKKGRR DAWLHGKPIG 300 DIKGRTTPFE DIVNCEGVFE MKSSSILEIM SPGKKPNLEF TLGRS

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MELFPAQPDL SLQISLPNPN PNPNPNPNTK TTSGWSWRRS DEEAMKASIN TAFKLSSFLA  60
NPDAMEPNSS SSSPFPPPPP PHLFYGRKNG SLLPPNQLYS QQQQLVHHHY HHQQQQGFHN  120
QREFDYLRPI RGIPVYHHHH HHQNPPSLLD SSPSTITTTP TTFLHSTTTN SNNIAKSQIL  180
SRFPAKRRVR APRMRWTTTL HARFVYAVEL LGGHERATPK SVLELMNVKD LTLAHVKSHL  240
QMYRTIKTTD RPATSSGQSD GLGSDLGGDQ NSENIFSPSK TGLSIKKGRR DAWLHGKPIG  300
DIKGRTTPFE DIVNCEGVFE MKSSSILEIM SPGKKPNLEF TLGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	9e-43	G2-like family protein