PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103931.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 1191aa MW: 132892 Da PI: 9.2843

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	46	79	3	38
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 W+++E e +++a +++G++ Wk++a+ + +R+ XP_028103931.1 46 QWSKDELECFYEAYRKHGKD-WKKVAAVLR-NRSVS 79 6***************99.******.9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 1191 aa Download sequence
MAPTRKSRSV NKHFSYVNEV SPSKDGEDSK KSMQRKRKLS DMLGSQWSKD ELECFYEAYR 60 KHGKDWKKVA AVLRNRSVSM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYCNLEGSDS 120 DQESNDATVT SRKPQKRARG NTSKGSDGLF LLRSQPVASS SGCLSLLKKR RSGGTRPRAV 180 GKRTPRFPIS YSYEKINGEK FFSPTRRGLK LKVDANDDDV AHEVALALAE ASQRGGSPQV 240 SQTPNRRTDT VMLSPIWSGE RMRAELELTS AKLGSERDED GFEGSLGSME ADNGDFARER 300 NFLMKTEVVG TAEARKGRKL HGKKLGVDNS GNHNLDDTKE ACSGTEGQNI SSVREKLEFE 360 VTDGKVARSS SQVSRKKSKK FLFKKDEGSA FDALQTLADL SLMMPTTATE NESSVPVKEE 420 DEGLVDKYGF LETVPTTRQR DKPKSSGVKV KGKLRFEATS LKTSKLGKVS VFNVSAIPEA 480 KDDPEQSTTK TSRKKPKLLG SKISKTGTHI GNQPNESQEN EIRDAGKKLM SKGKRSSYNN 540 SQHKQGKLVR HPENSALNNY PRGEKDDPAP STVQIPIANQ VNLHTKVRSR RKMELQKPQN 600 LRDLKFSDNL VDEQHNLPIP SIHDGASNLK EKLSNCLSNH RARRWCAFEW FYSAVDYPWF 660 AKREFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRFSK QFLREEKEKL NQYRESVRTH 720 YTELRTGTRE GLPADLVRPL SVGQRVIAIH PRTRQIHDGN ILTVDHTRCR VQFDQPELGV 780 EFVQDIDCMP LKPSETMPTL LERNTVAIDK FFENFSELKM NGQAKDQKPA GNVKFSPGEN 840 LEHLDVPSHM SPATYSLSNM LKQAKGVPTN FNSQAKIGSK ETANNQEAAN SQSSTLAQIQ 900 AKEADVQALA ELTRVLDKKE AVVSELRHMN DDVLENQRDG DNDLKDSEPF KKQYAAVLVQ 960 LNEVNEQVSS ALCCLRQRNT YLENSPFTWS RSNANLGDSG GSLSSLDQSA NHMQESESHV 1020 HEIVESSRIK ARTVVDAAMQ AMSSLKGGRN TVERIEEAID YVSNQLSLDD PCMMPMRPST 1080 PADPIHGGLA SQDQLTSCTL SSLHAPELKL KTEADRNEAQ IPSELISHCV STLFMIQKCT 1140 ERQFPPADVA RMLDSAVTGL QPCCSQNRPI YAEIQKCMGI IRNQILALVP T

Sequence ? help Back to Top

Protein Sequence Length: 1191 aa Download sequence

MAPTRKSRSV NKHFSYVNEV SPSKDGEDSK KSMQRKRKLS DMLGSQWSKD ELECFYEAYR  60
KHGKDWKKVA AVLRNRSVSM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYCNLEGSDS  120
DQESNDATVT SRKPQKRARG NTSKGSDGLF LLRSQPVASS SGCLSLLKKR RSGGTRPRAV  180
GKRTPRFPIS YSYEKINGEK FFSPTRRGLK LKVDANDDDV AHEVALALAE ASQRGGSPQV  240
SQTPNRRTDT VMLSPIWSGE RMRAELELTS AKLGSERDED GFEGSLGSME ADNGDFARER  300
NFLMKTEVVG TAEARKGRKL HGKKLGVDNS GNHNLDDTKE ACSGTEGQNI SSVREKLEFE  360
VTDGKVARSS SQVSRKKSKK FLFKKDEGSA FDALQTLADL SLMMPTTATE NESSVPVKEE  420
DEGLVDKYGF LETVPTTRQR DKPKSSGVKV KGKLRFEATS LKTSKLGKVS VFNVSAIPEA  480
KDDPEQSTTK TSRKKPKLLG SKISKTGTHI GNQPNESQEN EIRDAGKKLM SKGKRSSYNN  540
SQHKQGKLVR HPENSALNNY PRGEKDDPAP STVQIPIANQ VNLHTKVRSR RKMELQKPQN  600
LRDLKFSDNL VDEQHNLPIP SIHDGASNLK EKLSNCLSNH RARRWCAFEW FYSAVDYPWF  660
AKREFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRFSK QFLREEKEKL NQYRESVRTH  720
YTELRTGTRE GLPADLVRPL SVGQRVIAIH PRTRQIHDGN ILTVDHTRCR VQFDQPELGV  780
EFVQDIDCMP LKPSETMPTL LERNTVAIDK FFENFSELKM NGQAKDQKPA GNVKFSPGEN  840
LEHLDVPSHM SPATYSLSNM LKQAKGVPTN FNSQAKIGSK ETANNQEAAN SQSSTLAQIQ  900
AKEADVQALA ELTRVLDKKE AVVSELRHMN DDVLENQRDG DNDLKDSEPF KKQYAAVLVQ  960
LNEVNEQVSS ALCCLRQRNT YLENSPFTWS RSNANLGDSG GSLSSLDQSA NHMQESESHV  1020
HEIVESSRIK ARTVVDAAMQ AMSSLKGGRN TVERIEEAID YVSNQLSLDD PCMMPMRPST  1080
PADPIHGGLA SQDQLTSCTL SSLHAPELKL KTEADRNEAQ IPSELISHCV STLFMIQKCT  1140
ERQFPPADVA RMLDSAVTGL QPCCSQNRPI YAEIQKCMGI IRNQILALVP T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein