PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104048.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 1186aa MW: 131673 Da PI: 9.4182

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.3e-10	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a++++G++ Wk++a+ + +R+ +++ XP_028104048.1 46 QWSKEELERFYEAFRKYGKD-WKKVASVVR-NRSVEMV 81 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1186 aa Download sequence
MAPTRKSRSV NKRFSYVNEV SPSKDGENAK KSMQRKRKLT DMLGSQWSKE ELERFYEAFR 60 KYGKDWKKVA SVVRNRSVEM VEALYTMNRA YLSLPEGTAS VKGLIAMMTD HYCNMEGSDS 120 EQESNDGIGT SRKSQKRVRG KIWPNTSKGS DGQFLSYSQP VASSSGCLPL LKKKRSGGSR 180 PRAVGRRTPR FPVSYSYEKV NGEKFFSPTR QGLKLKVDAN DDDVAHEVAL ALAEASQRGG 240 SPQVSQTPNR RTDSIMSSPI RSAERMRAEL ELTSAKLGSE MDEDGFEGSL GSMEADNGDF 300 ARDRNYLIQT KGVGATEARK GRRLHGKKLQ VDDSGNNLLD DIKEACSGTE EEQNIGAARG 360 KLEFEVKDGK LALSSSQASR KKSKKVLFRR DEGSAFDALQ TLADLSLMMP ATAIENESSL 420 QVKDEDDDLV GKYGVLETVP ATHQRNRPKS LGVKAKGNQV VSGCRASSIK TSKIGKFSVL 480 DGTVPEAKEE PQQSTARLSR KKQKTSASKI PKTEAHIDSH PSESQELEAR DVGKKLISKG 540 KRSCYSNSQQ KQGKLVRHSE HSSSSTDLRG EKDDSALSTV QVPMANQVNL PTKVRSRRKM 600 ELQKPQNLKD LKFSELNDHK LNLPVPSFHD GALNLKEKLS NCLSNSRLRR WCAFEWFYSA 660 VDYPWFAKRE FVEYLNHVGL GHVPRLTRVE WGVIRSSLGK PRRFSEQFLK EEKEKLNQYR 720 DSVRTHYAEL RTGTREGLPT DLARPLSVGQ RVIAFHPRTR EIHDGNVLTV DHTRCRVQFD 780 QPELGVEFVQ DIDCMPLNPL ENMPATLARK AVTIDKFFEN FNELKMNGQA KDQKLEGYMK 840 RSPGENLEHV DVPSHVSPTT YPTSNLLKQT KGVSANPNLQ AKIGPKETAN NQQAANSQPS 900 ILAQIQAKEA DVQALAELTR ALDKKEAVVS ELRQMNDDVL ESQRDGDDAL KDSEPFKKQY 960 AAVLVQLNEV NEQVSSAIFC LRQRNTYQGS SPLTWPRITA NLGDSGGPLS SSEQPANHPQ 1020 ESGSHVHEIV ESSRIKARMM VDAAMQAMSS LKGGGNAVAR IEEAIDYVSS RLSLNDSCMV 1080 AMIPSTPADL INGTSSPLNK PEAELKNMSD KNEAQIPAEL ISHCVATLLM IQKCTERQFP 1140 PADVAQILDS AVVSLQPCSL QNLPVYAEIQ KCMGIIRNQI LALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1186 aa Download sequence

MAPTRKSRSV NKRFSYVNEV SPSKDGENAK KSMQRKRKLT DMLGSQWSKE ELERFYEAFR  60
KYGKDWKKVA SVVRNRSVEM VEALYTMNRA YLSLPEGTAS VKGLIAMMTD HYCNMEGSDS  120
EQESNDGIGT SRKSQKRVRG KIWPNTSKGS DGQFLSYSQP VASSSGCLPL LKKKRSGGSR  180
PRAVGRRTPR FPVSYSYEKV NGEKFFSPTR QGLKLKVDAN DDDVAHEVAL ALAEASQRGG  240
SPQVSQTPNR RTDSIMSSPI RSAERMRAEL ELTSAKLGSE MDEDGFEGSL GSMEADNGDF  300
ARDRNYLIQT KGVGATEARK GRRLHGKKLQ VDDSGNNLLD DIKEACSGTE EEQNIGAARG  360
KLEFEVKDGK LALSSSQASR KKSKKVLFRR DEGSAFDALQ TLADLSLMMP ATAIENESSL  420
QVKDEDDDLV GKYGVLETVP ATHQRNRPKS LGVKAKGNQV VSGCRASSIK TSKIGKFSVL  480
DGTVPEAKEE PQQSTARLSR KKQKTSASKI PKTEAHIDSH PSESQELEAR DVGKKLISKG  540
KRSCYSNSQQ KQGKLVRHSE HSSSSTDLRG EKDDSALSTV QVPMANQVNL PTKVRSRRKM  600
ELQKPQNLKD LKFSELNDHK LNLPVPSFHD GALNLKEKLS NCLSNSRLRR WCAFEWFYSA  660
VDYPWFAKRE FVEYLNHVGL GHVPRLTRVE WGVIRSSLGK PRRFSEQFLK EEKEKLNQYR  720
DSVRTHYAEL RTGTREGLPT DLARPLSVGQ RVIAFHPRTR EIHDGNVLTV DHTRCRVQFD  780
QPELGVEFVQ DIDCMPLNPL ENMPATLARK AVTIDKFFEN FNELKMNGQA KDQKLEGYMK  840
RSPGENLEHV DVPSHVSPTT YPTSNLLKQT KGVSANPNLQ AKIGPKETAN NQQAANSQPS  900
ILAQIQAKEA DVQALAELTR ALDKKEAVVS ELRQMNDDVL ESQRDGDDAL KDSEPFKKQY  960
AAVLVQLNEV NEQVSSAIFC LRQRNTYQGS SPLTWPRITA NLGDSGGPLS SSEQPANHPQ  1020
ESGSHVHEIV ESSRIKARMM VDAAMQAMSS LKGGGNAVAR IEEAIDYVSS RLSLNDSCMV  1080
AMIPSTPADL INGTSSPLNK PEAELKNMSD KNEAQIPAEL ISHCVATLLM IQKCTERQFP  1140
PADVAQILDS AVVSLQPCSL QNLPVYAEIQ KCMGIIRNQI LALIPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein