PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028104142.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YC
Protein Properties Length: 123aa    MW: 13263.2 Da    PI: 10.4792
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028104142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC1092.7e-34301101998
           NF-YC  19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                     h+lPlarikki+k + +dvkmis eaP+++skacelfi e+t rsw+ + + krrtl+k d+a+av  td fdflv+ v  
  XP_028104142.1  30 HSLPLARIKKIMKkSSDDVKMISGEAPIVFSKACELFIEEVTRRSWMMTVQGKRRTLHKEDVASAVVATDNFDFLVNLVSD 110
                     89**********825689**********************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MRQARTYSRI VSGSGGGGGG GGMSGRSGPH SLPLARIKKI MKKSSDDVKM ISGEAPIVFS  60
KACELFIEEV TRRSWMMTVQ GKRRTLHKED VASAVVATDN FDFLVNLVSD SAKSKGNPEI  120
MET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.34e-32NF-YC family protein