PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104217.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 386aa MW: 45354.8 Da PI: 6.7311

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.8	1.6e-22	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y ++ Fs+r+++ kk+k +++i++r+fvC+keg+ + +k++ ++++ra+trtgC+a l v+++ +gk ++++++++HnHel+ XP_028104217.1 25 DFYNAYEGRMRFSIRREYCKKNKFTKQIISRNFVCNKEGFWKVDKRD-PLTKTPRAKTRTGCEAWLFVTLDVsTGKLVMIDFKEKHNHELV 114 6****************************************9999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEPDNDCDWK PKEGMTFDSE EGAYDFYNAY EGRMRFSIRR EYCKKNKFTK QIISRNFVCN 60 KEGFWKVDKR DPLTKTPRAK TRTGCEAWLF VTLDVSTGKL VMIDFKEKHN HELVSPDYAH 120 MLPFQRRIPA IQAIQLDLAS ESGLRLGQSF ELMGREASGR QSLGFMKFDQ KNYLRTKRQK 180 CVAYGEVDNV LQYFQQIFLE NSSFFCAFQL DNEEQITNML WADTQMIMDY AQFGDVVTFD 240 TTYKLNRPFA SFVRFKHHRE TVIFGAALLY DETAKTFVWL FQTFLEAISK NAPKTLFTDQ 300 DAAMAKAIYI VMPDTSHHLC TWHLIQNALR HVNCLFQDKG VKGVLNRFMF DIEDENECKI 360 KWGEMLDTYD THDNHWLELT FGVKEK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEPDNDCDWK PKEGMTFDSE EGAYDFYNAY EGRMRFSIRR EYCKKNKFTK QIISRNFVCN  60
KEGFWKVDKR DPLTKTPRAK TRTGCEAWLF VTLDVSTGKL VMIDFKEKHN HELVSPDYAH  120
MLPFQRRIPA IQAIQLDLAS ESGLRLGQSF ELMGREASGR QSLGFMKFDQ KNYLRTKRQK  180
CVAYGEVDNV LQYFQQIFLE NSSFFCAFQL DNEEQITNML WADTQMIMDY AQFGDVVTFD  240
TTYKLNRPFA SFVRFKHHRE TVIFGAALLY DETAKTFVWL FQTFLEAISK NAPKTLFTDQ  300
DAAMAKAIYI VMPDTSHHLC TWHLIQNALR HVNCLFQDKG VKGVLNRFMF DIEDENECKI  360
KWGEMLDTYD THDNHWLELT FGVKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-77	FAR1 family protein