PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104573.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 440aa MW: 50955.5 Da PI: 6.713

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.9	3.8e-09	73	126	47	90
FAR1 47 k......tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028104573.1 73 PkyldrvAEKSRAPKALTRVGCKAQFRIRYDVdageGGKYVVTHFVIDHNHELA 126 0455555789999*************9987666689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MALAKVKREG DDYDIPNEAD DIHLINESRA EPYHGCEASP SNEEATNMKV EDGEADVKQE 60 MVDDAHRNDM RLPKYLDRVA EKSRAPKALT RVGCKAQFRI RYDVDAGEGG KYVVTHFVID 120 HNHELAEQHC VMYLRSHHGL NSVDKAQAMT MHNVGVKTSQ IMDYMVNQSG SYENVGFIRT 180 DLHSHIQAVR RAEVEDGDAQ DYAKFGDVLI FDSTYRTNTY KKPFVMLASV TNHFRTTIFA 240 YVLLANETIN TYTWVFETFM EAMGNKAPVS ILTDGDMAMR EATRRVFPDA RHRLCNWHLG 300 KNTVSNVYKS RFAHAFKQCM DMEMDEAKFK HGWTRMVEKF GLQTNSWVLE TYEKRDIWAE 360 AYMRGHFFAG MKSTQRSESM NAYFNPFLQH KLKLYEFPRH YDRALARIRY NEADAETINT 420 FPVLITPLRD IERHGAELFT

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MALAKVKREG DDYDIPNEAD DIHLINESRA EPYHGCEASP SNEEATNMKV EDGEADVKQE  60
MVDDAHRNDM RLPKYLDRVA EKSRAPKALT RVGCKAQFRI RYDVDAGEGG KYVVTHFVID  120
HNHELAEQHC VMYLRSHHGL NSVDKAQAMT MHNVGVKTSQ IMDYMVNQSG SYENVGFIRT  180
DLHSHIQAVR RAEVEDGDAQ DYAKFGDVLI FDSTYRTNTY KKPFVMLASV TNHFRTTIFA  240
YVLLANETIN TYTWVFETFM EAMGNKAPVS ILTDGDMAMR EATRRVFPDA RHRLCNWHLG  300
KNTVSNVYKS RFAHAFKQCM DMEMDEAKFK HGWTRMVEKF GLQTNSWVLE TYEKRDIWAE  360
AYMRGHFFAG MKSTQRSESM NAYFNPFLQH KLKLYEFPRH YDRALARIRY NEADAETINT  420
FPVLITPLRD IERHGAELFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-66	FAR1 family protein