PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028104717.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 322aa    MW: 37288 Da    PI: 7.6056
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028104717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.14e-2531119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++ + ++++r+e rtgC+a+l++k ++  +k+ v++++++HnH ++
  XP_028104717.1  31 DFYNSYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119
                     6********************9.6666****************9999.99*******************99989**************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEPNNHENDG GECDWKPRIR MTFDTEQEVY DFYNSYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG KVGSILQYFR DKSLENPSFF YSVQLDNKEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFTSF VGFNHHRETV IFGAALMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFTDQDA AMAFLFLSDL AH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-77FAR1 family protein