PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104938.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 153aa MW: 16458.8 Da PI: 7.2422

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.5	1.8e-05	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ +e e++ C ++ lC +C ++ H H+ v XP_028104938.1 4 QCNVCEVAEANVLCCADEAALCWSCDEKVHAAnklaskHQSV 45 7****99*******************656777777765 PP
2	zf-B_box	31.5	3.7e-10	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC++C +++H H XP_028104938.1 53 PMPKCDICQETVGYFFCLEDRALLCRKCDVAIHTAntfvssH 94 689******9*******************654555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MKIQCNVCEV AEANVLCCAD EAALCWSCDE KVHAANKLAS KHQSVSLSAS SSPMPKCDIC 60 QETVGYFFCL EDRALLCRKC DVAIHTANTF VSSHRRFLLT GVKVGLEPTE PGVSASSGTA 120 QSSEKISETE SRSVPRKGTP MLLTGQYNKV SPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-56	DBB family protein