PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105098.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 384aa MW: 44108.6 Da PI: 6.5876

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.5	2.1e-13	53	139	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk++GF + ++++ + +ge++ ++ r+++++ + +++ +++++Cka++k ++++dgk+++t+++leH+H+l+p XP_028105098.1 53 FYAQYAKHCGFAIAFRSQNLT-SDGEVKYFGIEYTRARLRTKRSEI--NPLEPSLSSKIDCKARVKASLQNDGKYKLTTVVLEHTHDLVP 139 9***********9988887.788788888888888888777766..8899*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
FGYQTKPDSN NNSLNGSEEV EEQDNNLDIN EIGEVEEPEK GMYFSSKQEV YAFYAQYAKH 60 CGFAIAFRSQ NLTSDGEVKY FGIEYTRARL RTKRSEINPL EPSLSSKIDC KARVKASLQN 120 DGKYKLTTVV LEHTHDLVPT DSRHFAMNKR IHTPVKRRLE VNDAAGIGVV RNFHSIVVEA 180 GGYEALTFDE RDARNYIENA RRLRLGLGDA ESVTLYFHKM QQQNSNFYSA IDLDEDGRMR 240 NLFWADARSR TAYKAFGDVV SFDTTYLTNK YDMPFAPFVG VNHHGQTILF GCGLLSNENT 300 ETFVWLFKEW LSCMSDAPPK AIITDQCRAM QNAIEIIFPQ ARHRWCLWHV MKKIPEKLRG 360 YSQYEGIKVG LQNVVYDSLT KDEF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

FGYQTKPDSN NNSLNGSEEV EEQDNNLDIN EIGEVEEPEK GMYFSSKQEV YAFYAQYAKH  60
CGFAIAFRSQ NLTSDGEVKY FGIEYTRARL RTKRSEINPL EPSLSSKIDC KARVKASLQN  120
DGKYKLTTVV LEHTHDLVPT DSRHFAMNKR IHTPVKRRLE VNDAAGIGVV RNFHSIVVEA  180
GGYEALTFDE RDARNYIENA RRLRLGLGDA ESVTLYFHKM QQQNSNFYSA IDLDEDGRMR  240
NLFWADARSR TAYKAFGDVV SFDTTYLTNK YDMPFAPFVG VNHHGQTILF GCGLLSNENT  300
ETFVWLFKEW LSCMSDAPPK AIITDQCRAM QNAIEIIFPQ ARHRWCLWHV MKKIPEKLRG  360
YSQYEGIKVG LQNVVYDSLT KDEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-74	FAR1 family protein