PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105338.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 121aa    MW: 13642.7 Da    PI: 4.14
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB81.21.4e-251641796
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                    mkk+lPanakiskdaketvqec+sefis++t                gddllwa++tlGfe+yveplkvyl ++r++ege
  XP_028105338.1  1 MKKALPANAKISKDAKETVQECISEFISLIT----------------GDDLLWAMTTLGFEEYVEPLKVYLLRFRDMEGE 64
                    9***************************986................79*****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MKKALPANAK ISKDAKETVQ ECISEFISLI TGDDLLWAMT TLGFEEYVEP LKVYLLRFRD  60
MEGEICCVLF GVEATGEPKN FGTKLRLELE IGCAMLGTEI KEWDFPEEEL ESNDLGSRNL  120
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.17e-34NF-YB family protein