PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105353.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51391.4 Da PI: 4.5352

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.7e-27	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_028105353.1 141 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 206 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK 60 SPPLKRKSET ADLVAESSDW NPSTGYVEAV GSPLQTPVSG KGGKAQKAPR MAKSNRSGSQ 120 TPVSNVGSPS GNNLTPIGPC RYDSSLGLLT KKFINLIKHA EDGILDLNKA AETLEVQKRR 180 IYDITNVLEG IGLIEKKLKN RIQWKGVDVS RPGETDENAV TIQAEVENLS LEERRLDEQI 240 REMQERLREL SENENNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVDY 300 PQRRYRVVLR STMGPVDVYL VSQFEEKFEE INNGVGASPS IPSTSGLNEN TSAPLLTEES 360 NQNEIEMQGQ EEAHRTCSDI NATPDFASGI MKIVPEVESD ADYWLLPDAD VSITDLWGTE 420 SVVEWNELGT LHDDFEMANV ITPRPQTPPS STTEVPSAAN TTGR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK  60
SPPLKRKSET ADLVAESSDW NPSTGYVEAV GSPLQTPVSG KGGKAQKAPR MAKSNRSGSQ  120
TPVSNVGSPS GNNLTPIGPC RYDSSLGLLT KKFINLIKHA EDGILDLNKA AETLEVQKRR  180
IYDITNVLEG IGLIEKKLKN RIQWKGVDVS RPGETDENAV TIQAEVENLS LEERRLDEQI  240
REMQERLREL SENENNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVDY  300
PQRRYRVVLR STMGPVDVYL VSQFEEKFEE INNGVGASPS IPSTSGLNEN TSAPLLTEES  360
NQNEIEMQGQ EEAHRTCSDI NATPDFASGI MKIVPEVESD ADYWLLPDAD VSITDLWGTE  420
SVVEWNELGT LHDDFEMANV ITPRPQTPPS STTEVPSAAN TTGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-149	E2F/DP family protein