PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105711.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 613aa MW: 68457.7 Da PI: 9.6658

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.8	1.8e-11	6	58	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 ++WTt E++ll++avk++G ++W+++ +++ + +t+ c++++++++ XP_028105711.1 6 LKWTTLEELLLACAVKRHGHKNWDSVVMELQnrtsfsLLLTAPVCRNKYYDLK 58 69*****************************9999999999999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MVEKELKWTT LEELLLACAV KRHGHKNWDS VVMELQNRTS FSLLLTAPVC RNKYYDLKRR 60 FMDEHDDDDD DKEVDTIPWI EELRKLRVAE LKQELHRYDL SIHSLQSKVK RLEEERERSL 120 KENENDDEKP DLEKDLKEER SENEKNDGDD TPEKVAVGGS DRSVNESNSA AVNEERRDAI 180 EAGDVKPDPA SSDSKPAGAD SYNDSTDTVA KHAAARTSQE EKGGGDPAEL RRDMAAAAAG 240 ESKEGTKESS DVQSTASLTR KRHREKEVSG GSSGGGGDEP VVSPATTIKR GAVKSEPLVG 300 LLDIIRSHKH GSMFERRLES QKTDEYKSMI RHHVDLETIR NRLDKGSYST STIKIHRDLL 360 LLVNNALVFF PKASPESVAA IELRDLITKE MIKKKKTQRY DSSPEPGPSK KAALQHKPKP 420 KPKSDTETFD SLLAKHKSSV PLIVCRKRSS ISAKVAEKQT NEKQKPSLMN PKPLVKTSAN 480 VDEEKENLTK VKMKEKPVTG TRSFRRSSSS SSKGRTDIDI DHERITKPSS KNASGSAEKG 540 EALKAADKKK NEVAVKKQGA ADFLKRIKRN SPLSKGTVLN NLVKSKGSDA NNGGRKEEKK 600 RGKESDDKAE WQW

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MVEKELKWTT LEELLLACAV KRHGHKNWDS VVMELQNRTS FSLLLTAPVC RNKYYDLKRR  60
FMDEHDDDDD DKEVDTIPWI EELRKLRVAE LKQELHRYDL SIHSLQSKVK RLEEERERSL  120
KENENDDEKP DLEKDLKEER SENEKNDGDD TPEKVAVGGS DRSVNESNSA AVNEERRDAI  180
EAGDVKPDPA SSDSKPAGAD SYNDSTDTVA KHAAARTSQE EKGGGDPAEL RRDMAAAAAG  240
ESKEGTKESS DVQSTASLTR KRHREKEVSG GSSGGGGDEP VVSPATTIKR GAVKSEPLVG  300
LLDIIRSHKH GSMFERRLES QKTDEYKSMI RHHVDLETIR NRLDKGSYST STIKIHRDLL  360
LLVNNALVFF PKASPESVAA IELRDLITKE MIKKKKTQRY DSSPEPGPSK KAALQHKPKP  420
KPKSDTETFD SLLAKHKSSV PLIVCRKRSS ISAKVAEKQT NEKQKPSLMN PKPLVKTSAN  480
VDEEKENLTK VKMKEKPVTG TRSFRRSSSS SSKGRTDIDI DHERITKPSS KNASGSAEKG  540
EALKAADKKK NEVAVKKQGA ADFLKRIKRN SPLSKGTVLN NLVKSKGSDA NNGGRKEEKK  600
RGKESDDKAE WQW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	393	423	KKKKTQRYDSSPEPGPSKKAALQHKPKPKPK
2	565	603	KRIKRNSPLSKGTVLNNLVKSKGSDANNGGRKEEKKRGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	1e-63	MYB_related family protein