PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105752.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 719aa MW: 82366.5 Da PI: 8.0291

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.3	1.4e-24	26	114	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +Yn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+ + +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028105752.1 26 CYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFWKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 114 7***************************************9999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MEPDNDCGWK PKEEMTFDSE EGAYDCYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFWKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH 120 MLPSQRKISN TQAIELDLAS ESGLHLGLSF ELMAREAGGR QSLDNEEQIT NMFWTDTQMV 180 MDYGQFGDVV TFDTTYKLNK EHRPFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF 240 LEAMSKKAPK TLFTDQDAAM AKTIPIVMPD TSNRLCTWHL MQNALRHDNC LFQDKGVKGV 300 LNRFMFDIED ENEWKMKWGE MLDTYDAYDN HWLKLIFGVK EKWGWPYVRS TWAAGMSTIQ 360 LSESFNVFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR VRAPFIMLSQ 420 MGNVYTKNIF EEFQGEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNERNV KMEMDGSLAC 480 SCSKFERKGI LCSHCLKVMR KILKLKEIPL QYIMKRWTKQ ARGKAVTNKF GNEIQVDVKF 540 KQASRYKTLM TAFRSIAYRA AETEKTCDFC CSQVAALGAH VESKISAHFC PEKEISINDQ 600 PQTLEVPSED NNHVLQILIG LKKKHPTSKG KRRIKGPCEL ALQASFKKKS RAQFVSSSNP 660 VAAPTVRPSP LSIGGDVSIH ENVTPLHPPP APPPHPYSVA MGGKQFGILW ITNIYDNAS

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MEPDNDCGWK PKEEMTFDSE EGAYDCYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN  60
KEGFWKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH  120
MLPSQRKISN TQAIELDLAS ESGLHLGLSF ELMAREAGGR QSLDNEEQIT NMFWTDTQMV  180
MDYGQFGDVV TFDTTYKLNK EHRPFASFVG FNHHRETVVF GAALLYDETA ETFVWLFQTF  240
LEAMSKKAPK TLFTDQDAAM AKTIPIVMPD TSNRLCTWHL MQNALRHDNC LFQDKGVKGV  300
LNRFMFDIED ENEWKMKWGE MLDTYDAYDN HWLKLIFGVK EKWGWPYVRS TWAAGMSTIQ  360
LSESFNVFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR VRAPFIMLSQ  420
MGNVYTKNIF EEFQGEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNERNV KMEMDGSLAC  480
SCSKFERKGI LCSHCLKVMR KILKLKEIPL QYIMKRWTKQ ARGKAVTNKF GNEIQVDVKF  540
KQASRYKTLM TAFRSIAYRA AETEKTCDFC CSQVAALGAH VESKISAHFC PEKEISINDQ  600
PQTLEVPSED NNHVLQILIG LKKKHPTSKG KRRIKGPCEL ALQASFKKKS RAQFVSSSNP  660
VAAPTVRPSP LSIGGDVSIH ENVTPLHPPP APPPHPYSVA MGGKQFGILW ITNIYDNAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-93	FAR1 family protein