PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106096.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 167aa    MW: 17358.3 Da    PI: 7.6391
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH375.7e-123860426
                    ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                     lC ++a++G Ck+G++CkF H+
  XP_028106096.1 38 QLCTHYAQNGVCKFGSSCKFDHP 60
                    69********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKLFTQSWTP LHHPPEWSLP QMNFVLSPMG LSLRPGAQLC THYAQNGVCK FGSSCKFDHP  60
LGTLSYSSSA SSLADMPVAP YPVGSSMGTL APSSSSELRH ELILGSNKDA ISTRMSSSTS  120
TSSGSVGLIL SKSGPASHPS VQQSDQASAS SITSSSVSQG GEVHTSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.21e-29C3H family protein