PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106104.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 178aa    MW: 20233.5 Da    PI: 10.3452
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-0717102888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++ GF + ++++++    +++ +  + C ++g+ + +kk      ++k  + ++++++gC  +l+ +k   d+ w v+     HnH+
  XP_028106104.1  17 RKNGFVIAIKTTNYG-GGHKTPMIYLACERSGQYRAHKKLkgddsNKKIVKITSTKKCGCPFELRAHKLMaDDDWIVDVACGMHNHA 102
                     678999999999888.5555788899******9988887778776777777899999*******9988777***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
VFKCKEELLS WVRDVGRKNG FVIAIKTTNY GGGHKTPMIY LACERSGQYR AHKKLKGDDS  60
NKKIVKITST KKCGCPFELR AHKLMADDDW IVDVACGMHN HASAKHFERH SFAGRLSEEE  120
TSLLVDMSKS MVRPKEILVT LKRKDALNGT TMKTIYNVRH RNNVIEKAGR SQMQHFVG