PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106125.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 198aa    MW: 23036.7 Da    PI: 9.5671
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.21.5e-44121661128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...........................kvkaeekewyfFskrdkky 68 
                     lp+G+rF+ tdeel+++yLk k+++++ ++ +vi+e+d++k++PwdL                             ++k++++ew+fF+++d+ky
  XP_028106125.1  12 LPVGYRFRLTDEELINHYLKLKINSDEKQV-SVIREIDVCKCKPWDLLIfaliidiylikspnfgfdliyfyadksAIKTNDEEWFFFCPKDRKY 105
                     799************************999.99**************734799******************999988888999************ PP

             NAM  69 atgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++g+r nrat +gyWkatgkd ++ s   ++++g+kktLvfy  ra +g++t+Wv+heyr+
  XP_028106125.1 106 QNGHRLNRATVAGYWKATGKDSSIRSLrATTVIGMKKTLVFYASRALNGQRTNWVIHEYRA 166
                     ************************99756778***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSLSKILAEE SLPVGYRFRL TDEELINHYL KLKINSDEKQ VSVIREIDVC KCKPWDLLIF  60
ALIIDIYLIK SPNFGFDLIY FYADKSAIKT NDEEWFFFCP KDRKYQNGHR LNRATVAGYW  120
KATGKDSSIR SLRATTVIGM KKTLVFYASR ALNGQRTNWV IHEYRATRFL GNLMLLLPVN  180
FFFGISPSYY PGFTTVDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-58NAC family protein