PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106226.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 383aa    MW: 41404.9 Da    PI: 8.4807
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10320365655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P++    +k  s a++L +Av++Ik Lq
  XP_028106226.1 320 SIAERDRRTRISGKLKNLQELVPNL----DKQTSYADMLDLAVQHIKVLQ 365
                     689*********************9....788***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MYQSSSSSSS QGSVVPTNGS GSGSGLIRYD SAPGSFLTSA VDSVMGATRD FSSLRSQHLN  60
LIASSSLPRY FSTDTSESTC KANPPPPDPK DHKNEPTTTR CLLQTPTPYG FNEIEVGSDF  120
PTTRVTSINL NPKSSAAGSL VRHSSSPAGF LNHLTSALTA PPTTPPPPPP PDNGFSVTRG  180
IGRYNSKGVS HSGNGISRLN SQLSFTRQDS LSHISEENEN VANGIRTDNG HRKAAHSYAT  240
PSFGMGSWDD SNAIVFSASS SKRAKSMSSD VVHCLESQFQ FGLPQTDEEM STMENLLQIP  300
EDSVRCKIRA KRGYATHPRS IAERDRRTRI SGKLKNLQEL VPNLDKQTSY ADMLDLAVQH  360
IKVLQNQVQK LHKELENCTC GCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-76bHLH family protein