PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106410.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 686aa MW: 79511.8 Da PI: 8.413

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60	7.5e-19	41	126	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+vGFs+ ++++ ++g+ ++ Cs+ g+r+++++ + +++ +t++gCka+++ + +kdg++++t+++leHnH+l XP_028106410.1 41 FYGKYAKHVGFSIAHRAQHFG-DDGQLKNFAIECSRAGERKKRSEV--NPLKPSLSTKIGCKARVRGSVQKDGRYKLTTVNLEHNHDLI 126 9***********9988776.8999***********99877..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MSGRMEVDSN VGDNPSINIG EEVEEPKMGM CFSSREEVYT FYGKYAKHVG FSIAHRAQHF 60 GDDGQLKNFA IECSRAGERK KRSEVNPLKP SLSTKIGCKA RVRGSVQKDG RYKLTTVNLE 120 HNHDLIPTDS HHFAMNKKIL TPVKRRLEIN DQVGIGVSSN FHSMVIEAGG YESLTFDKRD 180 ARNYIERGRR LRLGEGDAES LQSYFMRMQA HSERFFYMID VDEEFRIRNL FWADARSRVT 240 YEAFGDVVSF DTTYLTNKYD MPFAPFVGVN HHGQSILLGC GLLSSEDTNT FVWLFKSWLS 300 CMSNHPPKAI ITDQCRAMQS AIEIVFPQAR HRWCLWHIMK KIPEKLKGYA QYEAIKLAMQ 360 NAVYDCLTRA EFESKWEEML ATFNLYDNEW LGLLYDERHR WVPVYVKDIF WAGMSITQRS 420 ESMNAFFDGY VNPKTTLKQF IEQYDNALRS KVEKEKKADF NSRHKLFDCL TIYGFEKQFQ 480 QAYTNAKFKE VQEELKRLVY CQPLFLKEEG SISTYNVQEA MVVCEKMKHV DFVVYFNSTE 540 CEVQCMCRLF EFRGIMCAHS LAVLVRRCIN EVPSKYILPR WRKDVDREYA CIKTTYTGFG 600 NDFNASTYER MNKKLIAIVQ LASNSKGKTK IIDLGFDEIK ERVMKEESGD GSNLPCSRKS 660 PICTSSTQGA TSRKVKRPSC YQTKDY

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MSGRMEVDSN VGDNPSINIG EEVEEPKMGM CFSSREEVYT FYGKYAKHVG FSIAHRAQHF  60
GDDGQLKNFA IECSRAGERK KRSEVNPLKP SLSTKIGCKA RVRGSVQKDG RYKLTTVNLE  120
HNHDLIPTDS HHFAMNKKIL TPVKRRLEIN DQVGIGVSSN FHSMVIEAGG YESLTFDKRD  180
ARNYIERGRR LRLGEGDAES LQSYFMRMQA HSERFFYMID VDEEFRIRNL FWADARSRVT  240
YEAFGDVVSF DTTYLTNKYD MPFAPFVGVN HHGQSILLGC GLLSSEDTNT FVWLFKSWLS  300
CMSNHPPKAI ITDQCRAMQS AIEIVFPQAR HRWCLWHIMK KIPEKLKGYA QYEAIKLAMQ  360
NAVYDCLTRA EFESKWEEML ATFNLYDNEW LGLLYDERHR WVPVYVKDIF WAGMSITQRS  420
ESMNAFFDGY VNPKTTLKQF IEQYDNALRS KVEKEKKADF NSRHKLFDCL TIYGFEKQFQ  480
QAYTNAKFKE VQEELKRLVY CQPLFLKEEG SISTYNVQEA MVVCEKMKHV DFVVYFNSTE  540
CEVQCMCRLF EFRGIMCAHS LAVLVRRCIN EVPSKYILPR WRKDVDREYA CIKTTYTGFG  600
NDFNASTYER MNKKLIAIVQ LASNSKGKTK IIDLGFDEIK ERVMKEESGD GSNLPCSRKS  660
PICTSSTQGA TSRKVKRPSC YQTKDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-128	FAR1 family protein