PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106483.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 512aa MW: 59815.5 Da PI: 7.8186

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22	5.4e-07	48	124	1	79
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +fY +Y k++GF v ++++ ++ge++ C++ kr+++++ ++ +++ ++ ++Ckak +++ ++ g w+ XP_028106483.1 48 SFYAKYVKHLGFAVAYRTQNIG-QDGEVKYCGIECTRARKRTKRSEV--HHLEPSLSSFIECKAKRRLEINDeAGIWVAR 124 5***********99988876.8999***********99877..999***********999998878888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MDIDSNNPSL NGSKEVKEAG NNPSLNEIGE VEEPKKGMCF SSKQEVYSFY AKYVKHLGFA 60 VAYRTQNIGQ DGEVKYCGIE CTRARKRTKR SEVHHLEPSL SSFIECKAKR RLEINDEAGI 120 WVARNFYSIV VEAGGYEALT FDERDARHHI QSMRKLRLEV GDAESVALYF YRMQQQNSNF 180 HSAIDLDEDG RMRNLFWADV RSRATYKAFG DVTSAELCKM PLKLSFHNLN IVGAMQNAIE 240 VVFPQSQHRW CLWHIMKKIP EKLRGYAQYE FIKFALQNAI YDCFTKDEFD KEWQAMIAKF 300 KLDDNEWLGY DNALRSKVEK EMKADFKSRN KLYECLTVYV FKKQFHAAYT NTKFKEVQVE 360 VKLLLYCRAN LVKDEGEICT YHVNEVVLVG EKTKTVEFVV YFNASECELH CMCPSFEFKG 420 IMYAHAITVL LERCIYQVPD KYIVQRWRKD IERGYTYIST IYTKAWAVLN AKLHDKYHKM 480 LDEIIEITAN NDGKHEVLDL GLIEIKDRVR KN

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MDIDSNNPSL NGSKEVKEAG NNPSLNEIGE VEEPKKGMCF SSKQEVYSFY AKYVKHLGFA  60
VAYRTQNIGQ DGEVKYCGIE CTRARKRTKR SEVHHLEPSL SSFIECKAKR RLEINDEAGI  120
WVARNFYSIV VEAGGYEALT FDERDARHHI QSMRKLRLEV GDAESVALYF YRMQQQNSNF  180
HSAIDLDEDG RMRNLFWADV RSRATYKAFG DVTSAELCKM PLKLSFHNLN IVGAMQNAIE  240
VVFPQSQHRW CLWHIMKKIP EKLRGYAQYE FIKFALQNAI YDCFTKDEFD KEWQAMIAKF  300
KLDDNEWLGY DNALRSKVEK EMKADFKSRN KLYECLTVYV FKKQFHAAYT NTKFKEVQVE  360
VKLLLYCRAN LVKDEGEICT YHVNEVVLVG EKTKTVEFVV YFNASECELH CMCPSFEFKG  420
IMYAHAITVL LERCIYQVPD KYIVQRWRKD IERGYTYIST IYTKAWAVLN AKLHDKYHKM  480
LDEIIEITAN NDGKHEVLDL GLIEIKDRVR KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	6e-43	FAR1 family protein