PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106628.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 90aa    MW: 10837.3 Da    PI: 6.5439
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.5e-092968344
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     ++T++E++l+++  ++ G + W++Ia +++ gR ++++  +w
   XP_028106628.1 29 NMTEQEEDLIYRMYTLVGER-WDLIAGRIP-GRKPEEIERFW 68
                     68******************.*********.*********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MDKRPKKQPK ITTTSESEEV SSKEWDFRNM TEQEEDLIYR MYTLVGERWD LIAGRIPGRK  60
PEEIERFWIM KHTMKGLPQE ENSPIKKEHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-26MYB_related family protein