PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106697.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 229aa    MW: 26035.4 Da    PI: 8.6331
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.93.4e-2341128188
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     +fYn+Y+ +vGFs+rk++ +k+++++eit++tfvC+k+g+r  +k++    +++r+e r+gC a++ +k+++ +gk+   +++++HnH 
  XP_028106697.1  41 DFYNTYGGKVGFSIRKAYANKNRQTNEITSHTFVCYKKGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYIACDFVEHHNHV 128
                     6*******************************************999.9999************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDSVTEMGSV SEVMEENNIV DDCGWKPKVG MPFDSEQAAY DFYNTYGGKV GFSIRKAYAN  60
KNRQTNEITS HTFVCYKKGS RGIDKRDPLV KNPRQEVRCG CGARFSIKLD RISGKYIACD  120
FVEHHNHVVP QDCIHMLPSQ RKISTTQAIE VELVSQSGIP LRSAYELFGR ESGGRASLGF  180
TKLDQKNYLR SKRQKDLEYG ETGSVLHYFR KKTVKNPSFF YAVQLDCDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-38FAR1 family protein