PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106764.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 231aa MW: 26953.7 Da PI: 8.5534

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.3	2.8e-14	49	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y++Y+k+ GF v+k++ k ++ge + + C+ gk++ ++++ + r++t+t+Ck l+ +++ dg w + +l+leHn e++ XP_028106764.1 49 KYYSRYGKRNGFPVSKKYCKMG-DDGEKKYVNIACTHAGKAKIKTSN---IVKLRPQTKTECKVGLNANLQGDGIWILRSLRLEHNREMS 134 69************998887.9999***********99888...999*******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDKEISSGSN ENYDEIDIET EIEDTKNVEV EIEDPQVGMT FKSIDEIYKY YSRYGKRNGF 60 PVSKKYCKMG DDGEKKYVNI ACTHAGKAKI KTSNIVKLRP QTKTECKVGL NANLQGDGIW 120 ILRSLRLEHN REMSPSKSHF FKQNRILEPH VKRRLELNDS AGIIMNKNFT SLVLEARGHE 180 KLSYLEKDCR NHMDKVRRLK LKKGDSTTMY NYFVKMQVDN SEFFYVLDLE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-19	FAR1 family protein