PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106828.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 169aa    MW: 19183.9 Da    PI: 8.8714
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.3e-081461554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                     n++E++RR + ++  ++L +l+P++   psk  l   ++Le+A++Y+ +L
  XP_028106828.1 14 RNAVEKNRRLQTKDLNSKLASLIPNQ---PSKEiLPLRDMLEQATNYVVEL 61
                    59***********************6...55555*************8666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MQPGASGRLS NLDRNAVEKN RRLQTKDLNS KLASLIPNQP SKEILPLRDM LEQATNYVVE  60
LKQNAEELKR RKVELEGDNK VGSQDERLPV LTIRDMDSIL EVNLITGLNN NLKLHEVLSV  120
LKEEGVEVES ASYSSVGNQT FYTIHGKVLY SRIGIETSRV HERLKRLIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.11e-29bHLH family protein