PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107202.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 289aa    MW: 32059.7 Da    PI: 9.8996
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind345.31.5e-10582891301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mdddg + rn+gyye+  slk +lglqlmss+aerd+k+    r++ + + ++++a+++rd         m++  rd+++++        ++k+l
  XP_028107202.1   8 MDDDGLNMRNWGYYEQP-SLKGHLGLQLMSSMAERDTKPflsgRDHGV-ILNPNGAFHPRDcavseapvhMDY-VRDSWVNH--------RDKFL 91 
                     9*****99*******99.***********************8777777.99**********888888888888.77888877........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ + +          v ++ + ++ +q      l+++ +       +++  + e + + ke ++ kkr  +++pk++k kk+kk ++++k++
  XP_028107202.1  92 NMLPGNPN--------FMVYPEPSATHPMQI-----LQPPDTS------NDERVVMEDQGVRKEGESLKKRTGGSTPKAPKPKKTKKGPSVPKEN 167
                     ***95544........677899999998888.....4444333......455667778888999999999999**************99999999 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                      +++   +r+k  kk++d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekL
  XP_028107202.1 168 GNSSV--QRAKPAKKNMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 260
                     98888..79************************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a+eGy++snp+DL++hWAkHGtnkfvtir
  XP_028107202.1 261 ASEGYNFSNPIDLRTHWAKHGTNKFVTIR 289
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAQSVVSMDD DGLNMRNWGY YEQPSLKGHL GLQLMSSMAE RDTKPFLSGR DHGVILNPNG  60
AFHPRDCAVS EAPVHMDYVR DSWVNHRDKF LNMLPGNPNF MVYPEPSATH PMQILQPPDT  120
SNDERVVMED QGVRKEGESL KKRTGGSTPK APKPKKTKKG PSVPKENGNS SVQRAKPAKK  180
NMDVVINGID MDISGIPIPV CSCTGTPQQC YRWGCGGWQS ACCTTTISIY PLPMSTKRRG  240
ARIAGRKMSQ GAFKKVLEKL ASEGYNFSNP IDLRTHWAKH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-103BBR-BPC family protein