PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107222.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 495aa MW: 54855.9 Da PI: 6.7881

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6e-12	348	395	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+ + ++ K++Ka+ L A+ YI +Lq XP_028107222.1 348 NHVEAERQRREKLNQRFYALRRAVVPN----ISKMDKASLLGDAITYITDLQ 395 799********************98....79***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGEKFWLNEE DKCMIEAVLG SESFEFFVAS ASGNVLSEFV SSARDLGVQK GLCKVVEGSN 60 WNYAMFWQVS KSKSGNSALI WGDGHCKELK GSEVENGNCS KDRKLDEENR KKGVLQKLHA 120 CFGGSEEDNY AGNLDSVSDL EMFYLASMYY SFPFDKPSSP SQSFNTGRVI WASDAKSCSE 180 HYQSRSYLAK LARFETVVFI PLKAGVVEIG SVKSVPEEQG VIQMVKTTLG GPLSVQAKVV 240 AKIFGHELSL GGAKSRPMTI SFSPKVEDDS GFTSESYDLQ AVGTNQVYGN SSNGSRSDDG 300 EAKLFPQMNQ VIVSGLDQGQ EDLLIQSDER KPRKRGRKPA NGREEPLNHV EAERQRREKL 360 NQRFYALRRA VVPNISKMDK ASLLGDAITY ITDLQKKIRI LETEKYMGNN KQKQCIVPEI 420 DFQARHEDAV VRVSCPLDAH PVSRVIKAFR EHQVIAQESK VSTTSNGEIV HSFSIRTQDG 480 AAEDLKDKLV AALSL

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGEKFWLNEE DKCMIEAVLG SESFEFFVAS ASGNVLSEFV SSARDLGVQK GLCKVVEGSN  60
WNYAMFWQVS KSKSGNSALI WGDGHCKELK GSEVENGNCS KDRKLDEENR KKGVLQKLHA  120
CFGGSEEDNY AGNLDSVSDL EMFYLASMYY SFPFDKPSSP SQSFNTGRVI WASDAKSCSE  180
HYQSRSYLAK LARFETVVFI PLKAGVVEIG SVKSVPEEQG VIQMVKTTLG GPLSVQAKVV  240
AKIFGHELSL GGAKSRPMTI SFSPKVEDDS GFTSESYDLQ AVGTNQVYGN SSNGSRSDDG  300
EAKLFPQMNQ VIVSGLDQGQ EDLLIQSDER KPRKRGRKPA NGREEPLNHV EAERQRREKL  360
NQRFYALRRA VVPNISKMDK ASLLGDAITY ITDLQKKIRI LETEKYMGNN KQKQCIVPEI  420
DFQARHEDAV VRVSCPLDAH PVSRVIKAFR EHQVIAQESK VSTTSNGEIV HSFSIRTQDG  480
AAEDLKDKLV AALSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	330	338	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-172	bHLH family protein