PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107323.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 318aa MW: 34926.6 Da PI: 6.4074

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	4e-12	148	191	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_028107323.1 148 MAERKRREKLSQRFIALSAMVPGL-----KKMDKASVLGDAIKYLKHLQ 191 79********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MDMSLEKWIS ELLVNSPGEN LQQSSSSESY TSCSTLNLNC TAAAAATAMA GGGGCENGYE 60 RPTKQIKTSI TEQFSPNFPI SFADFGSLPS SPSTNPPENI DNASEPKDEV VSNGDHASVP 120 LKNNPPKAGQ KRSNAITRTP LEVQDRVMAE RKRREKLSQR FIALSAMVPG LKKMDKASVL 180 GDAIKYLKHL QEHVKLLEEQ INKKSEESVV FVKKSHISGD DDSSSCDENF DGQALPEIEA 240 RISENHVLIR IHCEKQKGVA VKLLSEIEKI HLSVVNSSFL PFGQYAMDIT VVAQMDADFS 300 LTVKDLVRKL RSAVLKFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	155	ERKRRE
2	151	156	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	9e-59	bHLH family protein