PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107362.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 162aa    MW: 18176.6 Da    PI: 10.5411
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.17e-2180128355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa+a+++a+k+++g
  XP_028107362.1  80 YRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYNTAEEAARAYDEAAKRIRG 128
                     9*******.**********72....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MCGGAIISDF VPAHCGRKLM TDDLWSELDP FSDHFGLDLS SSNQSEKKTK SRKPKQLNKG  60
TSEKAARTKS ETQRTRKNAY RGIRQRPWGK WAAEIRDPHK GVRVWLGTYN TAEEAARAYD  120
EAAKRIRGDK AKLNFAQSPP PLPPPAKRQC VIPESTQVSF HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-39ERF family protein