PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107367.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 182aa    MW: 20955.9 Da    PI: 9.5468
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.86e-13849142
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    ++i +++ r  tf kR++g+lKK +EL +LC ++++ ii+ +
  XP_028107367.1  8 EFIADERVRRQTFRKRKAGLLKKLSELKTLCSVDACAIIYPT 49
                    57999999999****************************966 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MGRMVEYEFI ADERVRRQTF RKRKAGLLKK LSELKTLCSV DACAIIYPTN TTGSVAQPDV  60
WPSPSEANHL LQRFKNLPSP QQAANMMNQE KFLTQNILRV SKNFDKEKQK NRGFDIEQQM  120
IKLLFEKNLH DFSNLDDLRD VASLLDAKIN LVNDKIENLA RDENGNEIRS GSRCGKEKQQ  180
SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22590.22e-25M-type_MADS family protein