PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107384.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 253aa    MW: 28680.3 Da    PI: 8.3853
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003397119223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++++++ +L  H +  H
  XP_028107384.1  97 SCSVCSRVYPTSRLLSIHVSEaH 119
                     6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAMMDIIENR TPLGFPYWSP VLRHFSPDSS FFASGNIERE LLAKQVALDI NEDEKQQLQS  60
MEDEDNREVF CPIVGCGARL NSLDVFEDHY NARHTASCSV CSRVYPTSRL LSIHVSEAHD  120
SFFQAKVARG FAMYECLVDG CGVKLKSYKS RQQHLVDKHK FPTSFEFFKK AHTSKKQRQK  180
NQRKQSAHKR DEEASSAMQV EQETIDGLVS VVSKLSTSDA SPSSISFGHR HTRGFTFVPQ  240
VVQRGRRLDS SPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181KKQRQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-114C2H2 family protein