PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107486.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 346aa MW: 39239.3 Da PI: 8.5513

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.4e-52	39	167	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+v+yLkkkv++ + +l+++i+++d+yk++Pw+Lp k+ +++ew+fF++rd+ky++g r+nr++ +gyWkatg+dk++l++ XP_028107486.1 39 LPPGFRFHPTDEELIVYYLKKKVSSPTSPLFSIIADIDLYKFNPWELPGKALFGSNEWFFFTPRDRKYPNGARPNRTAGAGYWKATGTDKPILNS 133 79********************************************7777899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g+kk Lvfy+gr pkg+ktdWvmheyrl XP_028107486.1 134 gGLQCIGVKKALVFYQGRPPKGVKTDWVMHEYRL 167 45566*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVFRITKTIA YPTTWETESQ NSLSNCPIRG QIRMCSPHLP PGFRFHPTDE ELIVYYLKKK 60 VSSPTSPLFS IIADIDLYKF NPWELPGKAL FGSNEWFFFT PRDRKYPNGA RPNRTAGAGY 120 WKATGTDKPI LNSGGLQCIG VKKALVFYQG RPPKGVKTDW VMHEYRLLED SHSLPRLRGS 180 MRLDDWVLCR VRQKNNIPQQ IPEFSEESSF NSIPGLNFPF LNDPHNKNTI HSIDSGNEIK 240 THLQSPKART GLNDQEQEQA QAQWYLNFQG GPSMSSSTDG SSQYANEESV SPIKDVFKSL 300 KRSISVVSFG EEFPFSPSNN KRLHAVPTDS MEDSSIFQIC YLANCV

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVFRITKTIA YPTTWETESQ NSLSNCPIRG QIRMCSPHLP PGFRFHPTDE ELIVYYLKKK  60
VSSPTSPLFS IIADIDLYKF NPWELPGKAL FGSNEWFFFT PRDRKYPNGA RPNRTAGAGY  120
WKATGTDKPI LNSGGLQCIG VKKALVFYQG RPPKGVKTDW VMHEYRLLED SHSLPRLRGS  180
MRLDDWVLCR VRQKNNIPQQ IPEFSEESSF NSIPGLNFPF LNDPHNKNTI HSIDSGNEIK  240
THLQSPKART GLNDQEQEQA QAQWYLNFQG GPSMSSSTDG SSQYANEESV SPIKDVFKSL  300
KRSISVVSFG EEFPFSPSNN KRLHAVPTDS MEDSSIFQIC YLANCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	5e-76	NAC family protein