PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107683.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 606aa MW: 66702.8 Da PI: 7.7624

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.9	1.3e-24	123	176	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH++F+ea++++ G e+A+Pk+ilelm+v+gLt+e+v+SHLQkYR+ XP_028107683.1 123 KAKVVWTNALHSQFLEAIRSI-GLERAVPKKILELMNVPGLTRENVASHLQKYRI 176 6799***************.******************************6 PP
2	Myb_DNA-binding	30.2	1.1e-09	126	175	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a++ G + +k+I + m+ g+t++++ s++qky+ XP_028107683.1 126 VVWTNALHSQFLEAIRSIGLEraVPKKILELMNvPGLTRENVASHLQKYR 175 68***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MADEMVTSSQ SSQTSTSFRS ISILVVDDDT TCLSIVAAIL KSWNYQVAKK KGKTIIEEIG 60 SDEEMSVQET SQTDKGSNDD VESTSSANEY RKSTKESKRK TTTKDTNNSD KRENKDNCST 120 PKKAKVVWTN ALHSQFLEAI RSIGLERAVP KKILELMNVP GLTRENVASH LQKYRIFLKR 180 VSEASYKIQS ATERNMVERT FRSTFASGQP SSSMFNRSQR RYGGYVPVPN LGNNISCCST 240 QEASSTNFSM PRFGCTQSLL LCNQGNLKKP TIGNGSVKRP YNHQTSLSLH GNTSGGTGLM 300 TGPNLFEMYQ QKNQLAPQTQ SFKNGMLNYN STTSGVHGYN DIGVTGYGKM GAFNSSNNLN 360 LKPKPNGNSY KNNYAGYQMA GDGRLVGLGF KGREAPTNYN SNNFLMNGKQ NNESMITMPL 420 LSGNFGDNLA QGVITSNGFQ SQGQVLPTTF NCAIQQENNS VTPMPPTPLV QQNSFGNGQG 480 ESDRFFGLLN NVSDFDSNSF IQPFGEDDLS FNFLNQINIQ SPTQQDGSFS QYHVEANPLV 540 NQQSLGQFIQ KPGGGEMVSN FGSVKSQSDK YVPSFEQNPS QQDDEEFLKS VFASGEFDWD 600 DNPGRL

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MADEMVTSSQ SSQTSTSFRS ISILVVDDDT TCLSIVAAIL KSWNYQVAKK KGKTIIEEIG  60
SDEEMSVQET SQTDKGSNDD VESTSSANEY RKSTKESKRK TTTKDTNNSD KRENKDNCST  120
PKKAKVVWTN ALHSQFLEAI RSIGLERAVP KKILELMNVP GLTRENVASH LQKYRIFLKR  180
VSEASYKIQS ATERNMVERT FRSTFASGQP SSSMFNRSQR RYGGYVPVPN LGNNISCCST  240
QEASSTNFSM PRFGCTQSLL LCNQGNLKKP TIGNGSVKRP YNHQTSLSLH GNTSGGTGLM  300
TGPNLFEMYQ QKNQLAPQTQ SFKNGMLNYN STTSGVHGYN DIGVTGYGKM GAFNSSNNLN  360
LKPKPNGNSY KNNYAGYQMA GDGRLVGLGF KGREAPTNYN SNNFLMNGKQ NNESMITMPL  420
LSGNFGDNLA QGVITSNGFQ SQGQVLPTTF NCAIQQENNS VTPMPPTPLV QQNSFGNGQG  480
ESDRFFGLLN NVSDFDSNSF IQPFGEDDLS FNFLNQINIQ SPTQQDGSFS QYHVEANPLV  540
NQQSLGQFIQ KPGGGEMVSN FGSVKSQSDK YVPSFEQNPS QQDDEEFLKS VFASGEFDWD  600
DNPGRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	1e-25	ARR-B family protein