PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107996.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 562aa MW: 64354.6 Da PI: 7.6423

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67	4.7e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +k+ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka++++ + gk++vt++ +HnHela XP_028107996.1 92 FYNAYAKAKGFSIRKSRFNKN-KEGKVVSRLWLCSREGQRLPNYLDrvAEKSRAPKALTRVGCKAQFRIWYDAdageGGKYVVTHFIADHNHELA 185 9****************99.666699999******9988877899999***********8876666689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MAPTEVKREG DDYDIPNKAD DIRLMNESRA KPYHGCEAGL SNEEATNMNV EDAEADVKKE 60 MVDDAHRNDM VGDVERAILE QKFDSIEDGE AFYNAYAKAK GFSIRKSRFN KNKEGKVVSR 120 LWLCSREGQR LPNYLDRVAE KSRAPKALTR VGCKAQFRIW YDADAGEGGK YVVTHFIADH 180 NHELAKQHCV MYLRSHCTLN SADKAQAMAM RNVGVKTSQI MDYMVNQPGS YENVGFIRTD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDERFFYKTN AYKKPFVMLA GVTSHFKTTI 300 FACVLLANET SETCTWVLKT FMEAIGNKAL VSVLTDGDKA MRAAIRRVFP DARHRLYNWH 360 LGKNAVSNVH ISGFAHAFKQ YMDMETDETK FEHGWTTMVE KFGLQTNSWV LETYEKRHMW 420 AEAYMRGHFF AGMKSTQRSE CMNAYFNPFL QHKLKLYEFV RHYDRALARI RQKGTRDRPR 480 PTVDADTTHI TDREYNAESL PVRYKTGLVD PSTPHIKQRR LFFDASPDSK QPVGQYVSVE 540 AAVCKNDSTT IDEVNQVDST SY

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MAPTEVKREG DDYDIPNKAD DIRLMNESRA KPYHGCEAGL SNEEATNMNV EDAEADVKKE  60
MVDDAHRNDM VGDVERAILE QKFDSIEDGE AFYNAYAKAK GFSIRKSRFN KNKEGKVVSR  120
LWLCSREGQR LPNYLDRVAE KSRAPKALTR VGCKAQFRIW YDADAGEGGK YVVTHFIADH  180
NHELAKQHCV MYLRSHCTLN SADKAQAMAM RNVGVKTSQI MDYMVNQPGS YENVGFIRTD  240
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDERFFYKTN AYKKPFVMLA GVTSHFKTTI  300
FACVLLANET SETCTWVLKT FMEAIGNKAL VSVLTDGDKA MRAAIRRVFP DARHRLYNWH  360
LGKNAVSNVH ISGFAHAFKQ YMDMETDETK FEHGWTTMVE KFGLQTNSWV LETYEKRHMW  420
AEAYMRGHFF AGMKSTQRSE CMNAYFNPFL QHKLKLYEFV RHYDRALARI RQKGTRDRPR  480
PTVDADTTHI TDREYNAESL PVRYKTGLVD PSTPHIKQRR LFFDASPDSK QPVGQYVSVE  540
AAVCKNDSTT IDEVNQVDST SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-61	FAR1 family protein