PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108117.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 340aa MW: 39486.4 Da PI: 9.7811

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	31	117	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ksk+ + +++fvC+keg+r +k++ + ++++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028108117.1 31 DFYNTYGGRLGFSIRRGYVNKSKEGH---SSQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 117 6******************96555...9*********9999.99***************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MEPNNHENNG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGHSSQF 60 VCNKEGFRVV DKRDSLTKNP RQEVRTGCQA RLVIKWDRNI QKFFVSDFVE QHNHIFVPPE 120 CTHMLPSQRK ISASQATEID LAEKSGIRLN AAFELMGNEV GGRESLGFTK LDQKNYLRTK 180 RQNSLAYGEA GSILQYFRDK SLENPSFFYS VQLDNEEQIT NIFWADAQMI MDYGQFGNIV 240 TFDTTYKLNS AHRPFASFVG FNHHRFRFQN SPQAEECEYR WREEAKRRKN ERSKKSREAA 300 TSCIPSPHRG SRPAVVAVVP LPLSCRHRGR RPCSNRLKKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-57	FAR1 family protein