PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108140.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 365aa MW: 40287.2 Da PI: 6.4256

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	64.5	3.1e-20	18	119	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 td+e+ L++ ++g++ ++vik+++ y+ P++L+ +++wyf ++++kk + g+Wka+g ++++ +++ +g ++ XP_028108140.1 18 TDKEVF-TCLERMIQGESSVPANVIKNINPYQQLPSNLN------DEKWYFIHSEQKKD---------SEYGFWKAKGDADAIYT-GSSIIGWRT 95 789988.67*****99666699**********5......7899998875.........468**********.999** PP NAM 105 tLvfykgrapkgektdWvmheyrl 128 tL fy+g+a +g++tdWvm+eyr+ XP_028108140.1 96 TLEFYEGQALHGQRTDWVMQEYRI 119 ********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MCPPARVTPP DNIGLYWTDK EVFTCLERMI QGESSVPANV IKNINPYQQL PSNLNDEKWY 60 FIHSEQKKDS EYGFWKAKGD ADAIYTGSSI IGWRTTLEFY EGQALHGQRT DWVMQEYRIP 120 QKGLCSNHPP KESSLLCRIF LSSGTSPNHE TQHKLGGAAI AGSTTGQGCM SESQARNKDG 180 YTGPLAAAGE LPHSFVENVV DDYLELDDLL GEPESRCSSL DNTSCLTLTS DEYFDSLALM 240 QELEDEIDRN KQQQGKNANF KFCIAAASGK PNKVVMHPAT LGSLISSNGS KLPAEAENKK 300 LPDRKIPERV IKIEKTHDGK EGTSKSPTVA TSSSGSHKAV TEGEKKAQAG VTKKLKKDYL 360 RFMPF

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MCPPARVTPP DNIGLYWTDK EVFTCLERMI QGESSVPANV IKNINPYQQL PSNLNDEKWY  60
FIHSEQKKDS EYGFWKAKGD ADAIYTGSSI IGWRTTLEFY EGQALHGQRT DWVMQEYRIP  120
QKGLCSNHPP KESSLLCRIF LSSGTSPNHE TQHKLGGAAI AGSTTGQGCM SESQARNKDG  180
YTGPLAAAGE LPHSFVENVV DDYLELDDLL GEPESRCSSL DNTSCLTLTS DEYFDSLALM  240
QELEDEIDRN KQQQGKNANF KFCIAAASGK PNKVVMHPAT LGSLISSNGS KLPAEAENKK  300
LPDRKIPERV IKIEKTHDGK EGTSKSPTVA TSSSGSHKAV TEGEKKAQAG VTKKLKKDYL  360
RFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36160.1	1e-18	NAC family protein