PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108310.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 197aa    MW: 21845.8 Da    PI: 6.6782
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000123860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_028108310.1 38 YECTFCKRGFSNAQALGGHMNIH 60
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
METDPPQPPE NSDQAQAVVS TTTDDQQQGP RQAQARSYEC TFCKRGFSNA QALGGHMNIH  60
RKDKAKLKQA SNYQSSKTQP LYSPNPVPPN PIQISEFKSS SGEENRSRKW PGIFSTDQGT  120
TDHHHATSRD DHETHLGGGQ LRQLPLFAET VSWSENRDHK GLSSSHELGP EVDLELRLGH  180
EPQQDSSTAG TGIKKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-18C2H2 family protein