PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108392.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 418aa MW: 48438.1 Da PI: 7.9989

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.8	3.7e-23	54	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YAk vGFs+rk++ + + +++ +r++vCs++g+r+e++ + +++r ra tr+gC+a+++++ + gk+ vt+++ eHnH+la XP_028108392.1 54 DFYNQYAKVVGFSIRKDTRTMQ--ATKVLSRKWVCSRQGQRAEQHLAhIDRKRAARALTRVGCDAHFRIRYNLdVGKYIVTHFKMEHNHPLA 143 6*************986666..7779**********999885788999*************9989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MDPFGCTKFE RKLEDDEVCG NKEELGSHAN DPIQSLTKND VLELQFNSEE DANDFYNQYA 60 KVVGFSIRKD TRTMQATKVL SRKWVCSRQG QRAEQHLAHI DRKRAARALT RVGCDAHFRI 120 RYNLDVGKYI VTHFKMEHNH PLATSPCVPF LQSHRFVKIP DKAQVKTLHD VGVKTSQIMD 180 LLVQQSGSFA NVGFIHKDLH NYIQAERKVE MKDGDAECAL AYLRAKADAD PYFFYKYDKD 240 QENRLEKLFW ANSRSRLDYA AFGDVLVFDT TYRMNAYNKP FVIFAGVNNH FETTIFVCSL 300 LVDETIATYT WVLQKLLEAM DNKRPVSVLT DGDMAMREAI QKVFPSAKHC LCNWHMHRNA 360 MRNVRVDGFE GHFKHLMDLD ANEVVFEEAW SKIVRKYGLQ NNKWVSDTYN NKGMWAQS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MDPFGCTKFE RKLEDDEVCG NKEELGSHAN DPIQSLTKND VLELQFNSEE DANDFYNQYA  60
KVVGFSIRKD TRTMQATKVL SRKWVCSRQG QRAEQHLAHI DRKRAARALT RVGCDAHFRI  120
RYNLDVGKYI VTHFKMEHNH PLATSPCVPF LQSHRFVKIP DKAQVKTLHD VGVKTSQIMD  180
LLVQQSGSFA NVGFIHKDLH NYIQAERKVE MKDGDAECAL AYLRAKADAD PYFFYKYDKD  240
QENRLEKLFW ANSRSRLDYA AFGDVLVFDT TYRMNAYNKP FVIFAGVNNH FETTIFVCSL  300
LVDETIATYT WVLQKLLEAM DNKRPVSVLT DGDMAMREAI QKVFPSAKHC LCNWHMHRNA  360
MRNVRVDGFE GHFKHLMDLD ANEVVFEEAW SKIVRKYGLQ NNKWVSDTYN NKGMWAQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-75	FAR1 family protein