PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108728.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 721aa MW: 76960.1 Da PI: 5.9966

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	454	500	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_028108728.1 454 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 500 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MPLSEFYRMA RGSLESAQPK TMALSTDRSH GPDNELVELV WENGQIMMQG QSSRARRNST 60 NNFQSQTPKH RGKDLGNNAN NLKMGRFGVM DSVLDDFATE VQLGEMGLEQ DDDMVPWLSY 120 PIDDSLQHDY CSELLPELSG VTVNELSSQN SFASMDKRNS GNQTIRGSHL SLEQANAPKV 180 SSLEVGESLR SRSGQFNPWS FHESQTLDPS LTSGVSSIIS NNASNTKHGV CGDSIQAQAS 240 GLPNIKTQKQ DSGLPNTNAS IMNFSHFSRP AALVRANLQN VGAMATPGTS GTEVMAGKNK 300 GTAPSTGNLA DSALLDLSSG LRNEMGSLNQ RNLVPPKVDS KSVAAALEDS HTTGQSEAVC 360 REDVVKNDKS PKQILGSTAK TVEPVVASSS VCSGNSAERA SNDPNPTHNL KRKCHETDDS 420 EGRSEDVEEE SVGIRKAAPA RGGAGSKRSR AAEVHNLSER RRRDRINEKM RALQELIPNC 480 NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLYMPPMMLP PGMQHVHPAH MAHFSPMSVG 540 MGMGMGMGMG MGMGFGMGMM DMNGGSTMCP MIQMPHVQGH FPAPRPPPIS GPASFHGMVG 600 PNLQAFGHLG QGLAMSAPRA PLVPFSGGPP INSAVELNAS GVAAPVEVPN SAPSSNSKDL 660 REHTNNTDAS CPMNQTSGQC QAKNEGFEQC SVVLKNDQPQ DVGSSEDVNL TKENDIVPGG 720 D

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MPLSEFYRMA RGSLESAQPK TMALSTDRSH GPDNELVELV WENGQIMMQG QSSRARRNST  60
NNFQSQTPKH RGKDLGNNAN NLKMGRFGVM DSVLDDFATE VQLGEMGLEQ DDDMVPWLSY  120
PIDDSLQHDY CSELLPELSG VTVNELSSQN SFASMDKRNS GNQTIRGSHL SLEQANAPKV  180
SSLEVGESLR SRSGQFNPWS FHESQTLDPS LTSGVSSIIS NNASNTKHGV CGDSIQAQAS  240
GLPNIKTQKQ DSGLPNTNAS IMNFSHFSRP AALVRANLQN VGAMATPGTS GTEVMAGKNK  300
GTAPSTGNLA DSALLDLSSG LRNEMGSLNQ RNLVPPKVDS KSVAAALEDS HTTGQSEAVC  360
REDVVKNDKS PKQILGSTAK TVEPVVASSS VCSGNSAERA SNDPNPTHNL KRKCHETDDS  420
EGRSEDVEEE SVGIRKAAPA RGGAGSKRSR AAEVHNLSER RRRDRINEKM RALQELIPNC  480
NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLYMPPMMLP PGMQHVHPAH MAHFSPMSVG  540
MGMGMGMGMG MGMGFGMGMM DMNGGSTMCP MIQMPHVQGH FPAPRPPPIS GPASFHGMVG  600
PNLQAFGHLG QGLAMSAPRA PLVPFSGGPP INSAVELNAS GVAAPVEVPN SAPSSNSKDL  660
REHTNNTDAS CPMNQTSGQC QAKNEGFEQC SVVLKNDQPQ DVGSSEDVNL TKENDIVPGG  720
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	459	464	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-66	bHLH family protein