PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108729.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 693aa MW: 73977.8 Da PI: 6.0886

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.1e-16	426	472	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_028108729.1 426 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 472 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MPLSEFYRMA RGSLESAQPK TMALSTDRSH GPDNELVELV WENGQIMMQG QSSRARRNST 60 NNFQSQTPKH REVQLGEMGL EQDDDMVPWL SYPIDDSLQH DYCSELLPEL SGVTVNELSS 120 QNSFASMDKR NSGNQTIRGS HLSLEQANAP KVSSLEVGES LRSRSGQFNP WSFHESQTLD 180 PSLTSGVSSI ISNNASNTKH GVCGDSIQAQ ASGLPNIKTQ KQDSGLPNTN ASIMNFSHFS 240 RPAALVRANL QNVGAMATPG TSGTEVMAGK NKGTAPSTGN LADSALLDLS SGLRNEMGSL 300 NQRNLVPPKV DSKSVAAALE DSHTTGQSEA VCREDVVKND KSPKQILGST AKTVEPVVAS 360 SSVCSGNSAE RASNDPNPTH NLKRKCHETD DSEGRSEDVE EESVGIRKAA PARGGAGSKR 420 SRAAEVHNLS ERRRRDRINE KMRALQELIP NCNKVDKASM LDEAIEYLKT LQLQVQIMSM 480 GAGLYMPPMM LPPGMQHVHP AHMAHFSPMS VGMGMGMGMG MGMGMGFGMG MMDMNGGSTM 540 CPMIQMPHVQ GHFPAPRPPP ISGPASFHGM VGPNLQAFGH LGQGLAMSAP RAPLVPFSGG 600 PPINSAVELN ASGVAAPVEV PNSAPSSNSK DLREHTNNTD ASCPMNQTSG QCQAKNEGFE 660 QCSVVLKNDQ PQDVGSSEDV NLTKENDIVP GGD

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MPLSEFYRMA RGSLESAQPK TMALSTDRSH GPDNELVELV WENGQIMMQG QSSRARRNST  60
NNFQSQTPKH REVQLGEMGL EQDDDMVPWL SYPIDDSLQH DYCSELLPEL SGVTVNELSS  120
QNSFASMDKR NSGNQTIRGS HLSLEQANAP KVSSLEVGES LRSRSGQFNP WSFHESQTLD  180
PSLTSGVSSI ISNNASNTKH GVCGDSIQAQ ASGLPNIKTQ KQDSGLPNTN ASIMNFSHFS  240
RPAALVRANL QNVGAMATPG TSGTEVMAGK NKGTAPSTGN LADSALLDLS SGLRNEMGSL  300
NQRNLVPPKV DSKSVAAALE DSHTTGQSEA VCREDVVKND KSPKQILGST AKTVEPVVAS  360
SSVCSGNSAE RASNDPNPTH NLKRKCHETD DSEGRSEDVE EESVGIRKAA PARGGAGSKR  420
SRAAEVHNLS ERRRRDRINE KMRALQELIP NCNKVDKASM LDEAIEYLKT LQLQVQIMSM  480
GAGLYMPPMM LPPGMQHVHP AHMAHFSPMS VGMGMGMGMG MGMGMGFGMG MMDMNGGSTM  540
CPMIQMPHVQ GHFPAPRPPP ISGPASFHGM VGPNLQAFGH LGQGLAMSAP RAPLVPFSGG  600
PPINSAVELN ASGVAAPVEV PNSAPSSNSK DLREHTNNTD ASCPMNQTSG QCQAKNEGFE  660
QCSVVLKNDQ PQDVGSSEDV NLTKENDIVP GGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	436	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-65	bHLH family protein