PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108954.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 91aa    MW: 10268.6 Da    PI: 9.3634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-0722581854
                    HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +  ++L++llP+ + + +s K+s + +L+++++YI++L
  XP_028108954.1 22 NLVSKLQQLLPEiR-NRRSDKVSASKVLQETCNYIRNL 58
                    55689*******77.89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRQSA GASRISDDQI INLVSKLQQL LPEIRNRRSD KVSASKVLQE TCNYIRNLHR  60
EVDDLSDRLS QLLATLDADS AEASIIRSLI M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.19e-39bHLH family protein