PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109188.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 291aa    MW: 32976.4 Da    PI: 8.7743
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.46e-32622041128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 
                     lp+G++F+P+d+el+ e+L++k+  +         +   +    +++   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++   
  XP_028109188.1  62 LPAGVKFDPSDQELL-EHLEAKAWLDAphnklhplI---DefipTLEGEdGICYTHPERLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdi 151
                     799************.88998865555355554332...133322444436**********.555555677******************744445 PP

             NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        + +W++tgk+++v+  +g+++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  XP_028109188.1 152 dgnETRWHKTGKTRPVFI-NGKVKGHKKILVLYtnYGKQRKPEKTNWVMHQYHL 204
                     555889************.999***********6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MTWCSDCSDE PAIVRRSQPS TDNTVIAGKH ECIRRTKTKS CPSCGHQIKC QEKTGIHDLP  60
GLPAGVKFDP SDQELLEHLE AKAWLDAPHN KLHPLIDEFI PTLEGEDGIC YTHPERLPGV  120
SKDGLIRHFF HRPSKAYTTG TRKRRKVHTD IDGNETRWHK TGKTRPVFIN GKVKGHKKIL  180
VLYTNYGKQR KPEKTNWVMH QYHLGNNEDE RDGELVVSKV FYQTQPRQCG SIMKEPSPSK  240
SKGLKFKEHS NIVEYYNPTL ISFDQGDHCD PASPPPVIPN FNVHVGSSIV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-117NAC family protein